Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Stappiaceae
Genus
Stappia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Stappiaceae |
| Genus | Stappia |
| Species | Stappia indica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
825960 bp
Thymine Count
819759 bp
Guanine Count
1662501 bp
Cytosine Count
1703840 bp
Genome Length
5015470 bp
Protein-coding Genes
4471 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glutathione s-transferase | SAMN05421512_112229 | Not Available | Positive | 4304475 - 4305137 | 23974.6 |
| histidine triad (hit) family protein | SAMN05421512_112230 | Not Available | Negative | 4305153 - 4305587 | 15600.8 |
| hypothetical protein | SAMN05421512_112231 | Not Available | Negative | 4305796 - 4307055 | 47219.4 |
| glycerophosphoryl diester phosphodiesterase | SAMN05421512_112232 | Not Available | Negative | 4307167 - 4307937 | 28360.6 |
| enamine deaminase rida, house cleaning of reactive enamine intermediates, yjgf/yer057c/uk114 family | SAMN05421512_112233 | Not Available | Negative | 4307965 - 4308429 | 15883.2 |
| protein of unknown function | SAMN05421512_112234 | Not Available | Positive | 4308625 - 4309479 | 30900.3 |
| amino acid abc transporter substrate-binding protein, paat family | SAMN05421512_112235 | Not Available | Negative | 4309551 - 4310579 | 37217.3 |
| asparaginase | SAMN05421512_112236 | Not Available | Negative | 4310670 - 4311650 | 35053.6 |
| transcriptional regulator, gntr family | SAMN05421512_112237 | Not Available | Positive | 4311899 - 4312627 | 27038.3 |
| dna polymerase-4 | SAMN05421512_112238 | Not Available | Negative | 4312640 - 4313998 | 48875.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
