Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Stappiaceae
Genus
Stappia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Stappiaceae |
| Genus | Stappia |
| Species | Stappia indica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
825960 bp
Thymine Count
819759 bp
Guanine Count
1662501 bp
Cytosine Count
1703840 bp
Genome Length
5015470 bp
Protein-coding Genes
4471 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05421512_112219 | Not Available | Positive | 4294058 - 4294492 | 16475.0 |
| pantothenate synthetase | SAMN05421512_112220 | Not Available | Negative | 4294524 - 4295390 | 30650.0 |
| hypothetical protein | SAMN05421512_112221 | Not Available | Positive | 4295545 - 4296288 | 26601.7 |
| dnaj domain-containing protein | SAMN05421512_112222 | Not Available | Positive | 4296395 - 4297105 | 25107.1 |
| d-alanyl-d-alanine carboxypeptidase | SAMN05421512_112223 | Not Available | Negative | 4297153 - 4298703 | 54959.6 |
| phasin protein | SAMN05421512_112224 | Not Available | Positive | 4299375 - 4299707 | 12144.3 |
| atp-dependent clp protease adaptor protein clps | SAMN05421512_112225 | Not Available | Positive | 4300316 - 4300645 | 12625.2 |
| atp-dependent clp protease atp-binding subunit clpa | SAMN05421512_112226 | Not Available | Positive | 4300655 - 4303081 | 89054.9 |
| predicted branched-chain amino acid permease (azaleucine resistance) | SAMN05421512_112227 | Not Available | Positive | 4303235 - 4304011 | 27578.6 |
| branched-chain amino acid transport protein (azld) | SAMN05421512_112228 | Not Available | Positive | 4304008 - 4304358 | 12348.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
