Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Stappiaceae
Genus
Stappia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Stappiaceae |
| Genus | Stappia |
| Species | Stappia indica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
825960 bp
Thymine Count
819759 bp
Guanine Count
1662501 bp
Cytosine Count
1703840 bp
Genome Length
5015470 bp
Protein-coding Genes
4471 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| methyl-accepting chemotaxis sensory transducer with tarh sensor | SAMN05421512_101244 | Not Available | Positive | 270853 - 272616 | 62164.7 |
| predicted lipid-binding transport protein, tim44 family | SAMN05421512_101245 | Not Available | Positive | 272796 - 273830 | 35625.2 |
| hypothetical protein | SAMN05421512_101246 | Not Available | Positive | 274053 - 274385 | 12252.2 |
| hypothetical protein | SAMN05421512_101247 | Not Available | Negative | 274487 - 275398 | 33803.8 |
| hypothetical protein | SAMN05421512_101248 | Not Available | Negative | 275472 - 276251 | 27851.4 |
| ba14k-like protein | SAMN05421512_101249 | Not Available | Positive | 276463 - 277056 | 22252.1 |
| ba14k-like protein | SAMN05421512_101250 | Not Available | Positive | 277325 - 277843 | 18624.8 |
| asp-trnaasn/glu-trnagln amidotransferase a subunit | SAMN05421512_101251 | Not Available | Positive | 278015 - 279271 | 43451.9 |
| uncharacterized conserved protein, duf2336 family | SAMN05421512_101252 | Not Available | Negative | 279362 - 280450 | 39436.0 |
| small-conductance mechanosensitive channel | SAMN05421512_101253 | Not Available | Positive | 281385 - 283613 | 79702.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
