Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Stappiaceae
Genus
Stappia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Stappiaceae |
| Genus | Stappia |
| Species | Stappia indica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
825960 bp
Thymine Count
819759 bp
Guanine Count
1662501 bp
Cytosine Count
1703840 bp
Genome Length
5015470 bp
Protein-coding Genes
4471 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Putative major head protein | SAMN05421512_10889 | Not Available | Negative | 3116604 - 3118430 | 65061.1 |
| Portal protein | SAMN05421512_10890 | Not Available | Negative | 3118427 - 3119839 | 51080.6 |
| hypothetical protein | SAMN05421512_10891 | Not Available | Negative | 3119843 - 3120424 | 21253.2 |
| hypothetical protein | SAMN05421512_10892 | Not Available | Negative | 3120496 - 3120858 | 13828.8 |
| helix-turn-helix domain-containing protein | SAMN05421512_10893 | Not Available | Positive | 3120953 - 3121177 | 7942.72 |
| serine dehydrogenase proteinase | SAMN05421512_10894 | Not Available | Positive | 3121209 - 3122135 | 34422.2 |
| Gp02 protein | SAMN05421512_10895 | Not Available | Negative | 3122284 - 3124068 | 64807.3 |
| Attr | Not Available | Not Available | Positive | 3126933 - 3126982 | Not Available |
| Attl | Not Available | Not Available | Positive | 4507113 - 4507125 | Not Available |
| Peptidase m15 | SAMN05421512_113160 | Not Available | Negative | 4510519 - 4511193 | 24513.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
