Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Stappiaceae
Genus
Stappia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Stappiaceae |
| Genus | Stappia |
| Species | Stappia indica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
825960 bp
Thymine Count
819759 bp
Guanine Count
1662501 bp
Cytosine Count
1703840 bp
Genome Length
5015470 bp
Protein-coding Genes
4471 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 4-hydroxy-tetrahydrodipicolinate synthase | SAMN05421512_112179 | Not Available | Positive | 4256459 - 4257349 | 31848.4 |
| glycine/d-amino acid oxidase | SAMN05421512_112180 | Not Available | Positive | 4257366 - 4260275 | 100683.0 |
| l-glutamate abc transporter atp-binding protein /l-aspartate abc transporter atp-binding protein | SAMN05421512_112181 | Not Available | Positive | 4260278 - 4261006 | 26842.8 |
| dihydropyrimidinase | SAMN05421512_112182 | Not Available | Positive | 4261017 - 4262426 | 50818.4 |
| protein of unknown function | SAMN05421512_112183 | Not Available | Positive | 4262447 - 4262857 | 14799.8 |
| hypothetical protein | SAMN05421512_112184 | Not Available | Negative | 4262868 - 4263458 | 22678.1 |
| transcriptional regulator, asnc family | SAMN05421512_112185 | Not Available | Negative | 4263487 - 4263945 | 16973.7 |
| nucleoside recognition | SAMN05421512_112186 | Not Available | Positive | 4264062 - 4265048 | 35625.9 |
| uncharacterized iron-regulated membrane protein | SAMN05421512_112187 | Not Available | Negative | 4265122 - 4266507 | 50006.8 |
| hypothetical protein | SAMN05421512_112188 | Not Available | Negative | 4266637 - 4267158 | 17987.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
