Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Stappiaceae
Genus
Stappia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Stappiaceae |
| Genus | Stappia |
| Species | Stappia indica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
825960 bp
Thymine Count
819759 bp
Guanine Count
1662501 bp
Cytosine Count
1703840 bp
Genome Length
5015470 bp
Protein-coding Genes
4471 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 2fe-2s iron-sulfur cluster binding domain-containing protein | SAMN05421512_112169 | Not Available | Positive | 4247520 - 4247825 | 10678.0 |
| nadph-dependent 2,4-dienoyl-coa reductase, sulfur reductase | SAMN05421512_112170 | Not Available | Positive | 4247818 - 4249218 | 48708.8 |
| enamine deaminase rida, house cleaning of reactive enamine intermediates, yjgf/yer057c/uk114 family | SAMN05421512_112171 | Not Available | Positive | 4249215 - 4249556 | 12295.9 |
| acetylornithine deacetylase | SAMN05421512_112172 | Not Available | Negative | 4249616 - 4250968 | 47709.5 |
| aspartate dehydrogenase | SAMN05421512_112173 | Not Available | Negative | 4250965 - 4251780 | 28585.2 |
| amino acid abc transporter substrate-binding protein, paat family | SAMN05421512_112174 | Not Available | Negative | 4251926 - 4252801 | 31364.8 |
| phosphotriesterase-related protein | SAMN05421512_112175 | Not Available | Positive | 4252921 - 4253949 | 37201.5 |
| transcriptional regulator, gntr family | SAMN05421512_112176 | Not Available | Negative | 4253958 - 4254635 | 25124.1 |
| dna-binding transcriptional regulator, gntr family | SAMN05421512_112177 | Not Available | Positive | 4254757 - 4255401 | 23919.9 |
| amino acid abc transporter membrane protein, paat family | SAMN05421512_112178 | Not Available | Positive | 4255743 - 4256435 | 26048.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
