Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Stappiaceae
Genus
Stappia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Stappiaceae |
| Genus | Stappia |
| Species | Stappia indica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
825960 bp
Thymine Count
819759 bp
Guanine Count
1662501 bp
Cytosine Count
1703840 bp
Genome Length
5015470 bp
Protein-coding Genes
4471 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tripartite tricarboxylate transporter tctb family protein | SAMN05421512_112159 | Not Available | Positive | 4238527 - 4239021 | 17952.4 |
| putative tricarboxylic transport membrane protein | SAMN05421512_112160 | Not Available | Positive | 4239023 - 4240549 | 52902.5 |
| hypothetical protein | SAMN05421512_112161 | Not Available | Positive | 4240757 - 4241104 | 11944.0 |
| hypothetical protein | SAMN05421512_112162 | Not Available | Negative | 4241125 - 4241634 | 17460.3 |
| hypothetical protein | SAMN05421512_112163 | Not Available | Positive | 4241879 - 4242478 | 22089.7 |
| dna-binding transcriptional regulator, lysr family | SAMN05421512_112164 | Not Available | Negative | 4242509 - 4243429 | 34232.2 |
| trap-type c4-dicarboxylate transport system, small permease component | SAMN05421512_112165 | Not Available | Positive | 4243565 - 4244035 | 17946.5 |
| trap transporter, dctm subunit | SAMN05421512_112166 | Not Available | Positive | 4244032 - 4245330 | 45836.7 |
| trap-type c4-dicarboxylate transport system, substrate-binding protein | SAMN05421512_112167 | Not Available | Positive | 4245387 - 4246376 | 35688.3 |
| glycine/d-amino acid oxidase | SAMN05421512_112168 | Not Available | Positive | 4246445 - 4247545 | 39408.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
