Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Stappiaceae
Genus
Stappia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Stappiaceae |
| Genus | Stappia |
| Species | Stappia indica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
825960 bp
Thymine Count
819759 bp
Guanine Count
1662501 bp
Cytosine Count
1703840 bp
Genome Length
5015470 bp
Protein-coding Genes
4471 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05421512_112139 | Not Available | Negative | 4215950 - 4216651 | 23864.0 |
| ppx/gppa phosphatase | SAMN05421512_112140 | Not Available | Positive | 4216850 - 4217959 | 40671.0 |
| 23s rrna um-2552 2'-o-methyltransferase | SAMN05421512_112141 | Not Available | Positive | 4217969 - 4218667 | 25710.7 |
| inosine-5'-monophosphate dehydrogenase | SAMN05421512_112142 | Not Available | Positive | 4218856 - 4220358 | 52704.4 |
| hypothetical protein | SAMN05421512_112143 | Not Available | Negative | 4220453 - 4220680 | 8239.76 |
| 16s rrna (cytosine967-c5)-methyltransferase | SAMN05421512_112144 | Not Available | Positive | 4221070 - 4222368 | 47261.3 |
| tetratricopeptide repeat-containing protein | SAMN05421512_112145 | Not Available | Negative | 4222535 - 4223728 | 42798.2 |
| gmp synthase (glutamine-hydrolyzing) | SAMN05421512_112146 | Not Available | Positive | 4223974 - 4225539 | 57624.8 |
| hypothetical protein | SAMN05421512_112147 | Not Available | Positive | 4225794 - 4225883 | 3345.26 |
| two-component system, ompr family, sensor histidine kinase ades | SAMN05421512_112148 | Not Available | Negative | 4225965 - 4227038 | 38419.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
