Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Stappiaceae
Genus
Stappia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Stappiaceae |
| Genus | Stappia |
| Species | Stappia indica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
825960 bp
Thymine Count
819759 bp
Guanine Count
1662501 bp
Cytosine Count
1703840 bp
Genome Length
5015470 bp
Protein-coding Genes
4471 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| long-chain acyl-coa synthetase | SAMN05421512_112129 | Not Available | Negative | 4204749 - 4206554 | 66488.0 |
| amino acid/amide abc transporter atp-binding protein 2, haat family | SAMN05421512_112130 | Not Available | Negative | 4206566 - 4207375 | 29513.8 |
| amino acid/amide abc transporter substrate-binding protein, haat family | SAMN05421512_112131 | Not Available | Negative | 4207381 - 4208550 | 42396.8 |
| branched-chain amino acid transport system permease protein | SAMN05421512_112132 | Not Available | Negative | 4208587 - 4209630 | 37757.1 |
| branched-chain amino acid transport system permease protein | SAMN05421512_112133 | Not Available | Negative | 4209632 - 4210513 | 29796.6 |
| amino acid/amide abc transporter atp-binding protein 1, haat family | SAMN05421512_112134 | Not Available | Negative | 4210510 - 4211382 | 31706.3 |
| transcriptional regulator, gntr family | SAMN05421512_112135 | Not Available | Negative | 4211545 - 4212324 | 29143.2 |
| ankyrin repeat | SAMN05421512_112136 | Not Available | Negative | 4212615 - 4214321 | 60628.5 |
| hypothetical protein | SAMN05421512_112137 | Not Available | Negative | 4214345 - 4215634 | 46792.4 |
| Trna-gln | Not Available | Not Available | Positive | 4215796 - 4215869 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
