Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Stappiaceae
Genus
Stappia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Stappiaceae |
| Genus | Stappia |
| Species | Stappia indica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
825960 bp
Thymine Count
819759 bp
Guanine Count
1662501 bp
Cytosine Count
1703840 bp
Genome Length
5015470 bp
Protein-coding Genes
4471 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glyoxalase family protein | SAMN05421512_112119 | Not Available | Negative | 4196552 - 4197484 | 34292.1 |
| dna-binding transcriptional regulator, lysr family | SAMN05421512_112120 | Not Available | Positive | 4197537 - 4198511 | 35944.2 |
| protein n-acetyltransferase, rimj/riml family | SAMN05421512_112121 | Not Available | Positive | 4198628 - 4199122 | 18508.1 |
| hypothetical protein | SAMN05421512_112122 | Not Available | Positive | 4199225 - 4199680 | 15454.6 |
| antitoxin pard1/3/4 | SAMN05421512_112123 | Not Available | Positive | 4199688 - 4200011 | 12023.4 |
| toxin pare1/3/4 | SAMN05421512_112124 | Not Available | Positive | 4200155 - 4200301 | 5636.75 |
| nitronate monooxygenase | SAMN05421512_112125 | Not Available | Negative | 4200332 - 4201270 | 32706.1 |
| 2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-coa isomerase | SAMN05421512_112126 | Not Available | Negative | 4201305 - 4202099 | 27416.0 |
| enoyl-coa hydratase/carnithine racemase | SAMN05421512_112127 | Not Available | Negative | 4202096 - 4203487 | 48340.2 |
| acetyl-coa c-acetyltransferase | SAMN05421512_112128 | Not Available | Negative | 4203499 - 4204707 | 42260.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
