Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Stappiaceae
Genus
Stappia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Stappiaceae |
| Genus | Stappia |
| Species | Stappia indica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
825960 bp
Thymine Count
819759 bp
Guanine Count
1662501 bp
Cytosine Count
1703840 bp
Genome Length
5015470 bp
Protein-coding Genes
4471 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| catalase-peroxidase | SAMN05421512_112109 | Not Available | Negative | 4185083 - 4187287 | 80512.6 |
| lysr family transcriptional regulator, hydrogen peroxide-inducible genes activator | SAMN05421512_112110 | Not Available | Positive | 4187607 - 4188557 | 34756.0 |
| non-heme chloroperoxidase | SAMN05421512_112111 | Not Available | Negative | 4188547 - 4189365 | 29863.4 |
| predicted arabinose efflux permease, mfs family | SAMN05421512_112112 | Not Available | Negative | 4189362 - 4190999 | 56814.9 |
| hypothetical protein | SAMN05421512_112113 | Not Available | Negative | 4191005 - 4192873 | 68241.9 |
| xapx domain-containing protein | SAMN05421512_112114 | Not Available | Negative | 4192909 - 4193202 | 10070.6 |
| nicotinamidase-related amidase | SAMN05421512_112115 | Not Available | Negative | 4193280 - 4193936 | 23413.0 |
| helix-turn-helix domain-containing protein | SAMN05421512_112116 | Not Available | Negative | 4194050 - 4194949 | 34109.8 |
| hypothetical protein | SAMN05421512_112117 | Not Available | Negative | 4195127 - 4195843 | 25327.9 |
| phospholipase/carboxylesterase | SAMN05421512_112118 | Not Available | Negative | 4195875 - 4196477 | 21507.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
