Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Stappiaceae
Genus
Stappia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Stappiaceae |
| Genus | Stappia |
| Species | Stappia indica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
825960 bp
Thymine Count
819759 bp
Guanine Count
1662501 bp
Cytosine Count
1703840 bp
Genome Length
5015470 bp
Protein-coding Genes
4471 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aaa domain-containing protein | SAMN05421512_11259 | Not Available | Positive | 4131090 - 4131812 | 26320.2 |
| hypothetical protein | SAMN05421512_11260 | Not Available | Positive | 4131890 - 4132126 | 8538.48 |
| hypothetical protein | SAMN05421512_11261 | Not Available | Negative | 4132240 - 4132995 | 27971.8 |
| ornithine cyclodeaminase | SAMN05421512_11262 | Not Available | Negative | 4133027 - 4134013 | 35112.9 |
| single-strand binding protein | SAMN05421512_11263 | Not Available | Negative | 4134310 - 4134894 | 19452.3 |
| excinuclease abc subunit a | SAMN05421512_11264 | Not Available | Positive | 4135691 - 4138651 | 107915.0 |
| conserved hypothetical integral membrane protein | SAMN05421512_11265 | Not Available | Positive | 4139405 - 4140451 | 35046.2 |
| transcriptional regulator, lysr family | SAMN05421512_11266 | Not Available | Positive | 4140471 - 4141364 | 31662.2 |
| d-arginine dehydrogenase | SAMN05421512_11267 | Not Available | Positive | 4141449 - 4142549 | 38195.1 |
| fumarate reductase flavoprotein subunit | SAMN05421512_11268 | Not Available | Negative | 4142539 - 4143963 | 48332.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
