Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Stappiaceae
Genus
Stappia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Stappiaceae |
| Genus | Stappia |
| Species | Stappia indica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
825960 bp
Thymine Count
819759 bp
Guanine Count
1662501 bp
Cytosine Count
1703840 bp
Genome Length
5015470 bp
Protein-coding Genes
4471 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative abc transport system atp-binding protein | SAMN05421512_11249 | Not Available | Positive | 4121861 - 4122544 | 24351.6 |
| putative proteasome-type protease | SAMN05421512_11250 | Not Available | Negative | 4122557 - 4123288 | 26830.2 |
| transglutaminase-like enzyme, putative cysteine protease | SAMN05421512_11251 | Not Available | Negative | 4123409 - 4124230 | 29888.5 |
| uncharacterized conserved protein, alpha-e superfamily | SAMN05421512_11252 | Not Available | Negative | 4124310 - 4125257 | 36309.2 |
| uncharacterized conserved protein, circularly permuted atpgrasp superfamily | SAMN05421512_11253 | Not Available | Negative | 4125264 - 4126685 | 53013.6 |
| hypothetical protein | SAMN05421512_11254 | Not Available | Negative | 4126997 - 4127593 | 21626.6 |
| hth domain-containing protein | SAMN05421512_11255 | Not Available | Positive | 4127948 - 4128625 | 25403.7 |
| hypothetical protein | SAMN05421512_11256 | Not Available | Negative | 4128626 - 4128973 | 12977.8 |
| aldo/keto reductase | SAMN05421512_11257 | Not Available | Negative | 4129112 - 4129939 | 30366.2 |
| atp-dependent clp protease proteolytic subunit clpp | SAMN05421512_11258 | Not Available | Negative | 4130099 - 4130716 | 22489.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
