Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Stappiaceae
Genus
Stappia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Stappiaceae |
| Genus | Stappia |
| Species | Stappia indica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
825960 bp
Thymine Count
819759 bp
Guanine Count
1662501 bp
Cytosine Count
1703840 bp
Genome Length
5015470 bp
Protein-coding Genes
4471 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator, tetr family | SAMN05421512_11239 | Not Available | Positive | 4113012 - 4113614 | 20759.9 |
| 23s rrna pseudouridine955/2504/2580 synthase | SAMN05421512_11240 | Not Available | Positive | 4113738 - 4114748 | 37456.8 |
| phosphoglycolate phosphatase | SAMN05421512_11241 | Not Available | Positive | 4114950 - 4115444 | 17795.4 |
| chaperone required for the assembly of the f1-atpase | SAMN05421512_11242 | Not Available | Positive | 4115444 - 4116238 | 28532.9 |
| hypothetical protein | SAMN05421512_11243 | Not Available | Negative | 4116333 - 4116728 | 13076.7 |
| hypothetical protein | SAMN05421512_11244 | Not Available | Negative | 4116793 - 4117680 | 31141.4 |
| endonuclease/exonuclease/phosphatase family protein | SAMN05421512_11245 | Not Available | Positive | 4117833 - 4118690 | 33023.9 |
| transcriptional regulator, tetr family | SAMN05421512_11246 | Not Available | Negative | 4118709 - 4119377 | 24769.9 |
| hlyd family secretion protein | SAMN05421512_11247 | Not Available | Positive | 4119439 - 4120674 | 42678.8 |
| putative abc transport system permease protein | SAMN05421512_11248 | Not Available | Positive | 4120671 - 4121858 | 41901.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
