Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Stappiaceae
Genus
Stappia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Stappiaceae |
| Genus | Stappia |
| Species | Stappia indica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
825960 bp
Thymine Count
819759 bp
Guanine Count
1662501 bp
Cytosine Count
1703840 bp
Genome Length
5015470 bp
Protein-coding Genes
4471 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| small subunit ribosomal protein s5 | SAMN05421512_11219 | Not Available | Positive | 4096647 - 4097219 | 20512.7 |
| lsu ribosomal protein l30p | SAMN05421512_11220 | Not Available | Positive | 4097262 - 4097453 | 7147.83 |
| lsu ribosomal protein l15p | SAMN05421512_11221 | Not Available | Positive | 4097472 - 4097942 | 16156.7 |
| protein translocase subunit secy/sec61 alpha | SAMN05421512_11222 | Not Available | Positive | 4097992 - 4099326 | 47791.4 |
| adenylate kinase | SAMN05421512_11223 | Not Available | Positive | 4099323 - 4099919 | 20901.3 |
| ssu ribosomal protein s13p | SAMN05421512_11224 | Not Available | Positive | 4100078 - 4100446 | 13765.0 |
| ssu ribosomal protein s11p | SAMN05421512_11225 | Not Available | Positive | 4100518 - 4100907 | 13980.7 |
| dna-directed rna polymerase subunit alpha | SAMN05421512_11226 | Not Available | Positive | 4100987 - 4102009 | 37770.4 |
| lsu ribosomal protein l17p | SAMN05421512_11227 | Not Available | Positive | 4102088 - 4102513 | 15697.0 |
| do/deqq family serine protease | SAMN05421512_11228 | Not Available | Positive | 4102662 - 4104098 | 50359.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
