Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Stappiaceae
Genus
Stappia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Stappiaceae |
| Genus | Stappia |
| Species | Stappia indica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
825960 bp
Thymine Count
819759 bp
Guanine Count
1662501 bp
Cytosine Count
1703840 bp
Genome Length
5015470 bp
Protein-coding Genes
4471 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 5s ribosomal rna . bacterial tsu | Not Available | Not Available | Positive | 248544 - 248659 | 18.01 |
| 23s ribosomal rna . bacterial lsu | Not Available | Not Available | Positive | 248740 - 251464 | 18.01 |
| 16s rrna (cytosine1402-n4)-methyltransferase | SAMN05421512_101225 | Not Available | Negative | 248478 - 249497 | 36292.4 |
| mraz protein | SAMN05421512_101226 | Not Available | Negative | 249494 - 249949 | 16488.6 |
| hypothetical protein | SAMN05421512_101227 | Not Available | Positive | 250625 - 251512 | 31232.6 |
| transcriptional regulator, gntr family | SAMN05421512_101229 | Not Available | Negative | 251418 - 252872 | 50516.6 |
| hypothetical protein | SAMN05421512_101230 | Not Available | Positive | 253062 - 253760 | 25694.1 |
| transglycosylase slt domain-containing protein | SAMN05421512_101231 | Not Available | Negative | 253782 - 254282 | 17722.8 |
| n-acetylmuramoyl-l-alanine amidase | SAMN05421512_101232 | Not Available | Negative | 254520 - 255275 | 27628.7 |
| dnaj like chaperone protein | SAMN05421512_101233 | Not Available | Negative | 255316 - 256014 | 25417.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
