Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Stappiaceae
Genus
Stappia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Stappiaceae |
| Genus | Stappia |
| Species | Stappia indica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
825960 bp
Thymine Count
819759 bp
Guanine Count
1662501 bp
Cytosine Count
1703840 bp
Genome Length
5015470 bp
Protein-coding Genes
4471 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| d-xylose transport system permease protein | SAMN05421512_111213 | Not Available | Negative | 4070909 - 4072204 | 44991.2 |
| xylose-binding protein | SAMN05421512_111214 | Not Available | Negative | 4072327 - 4073361 | 35818.4 |
| sugar kinase of the nbd/hsp70 family, may contain an n-terminal hth domain | SAMN05421512_111215 | Not Available | Positive | 4073666 - 4074913 | 43717.1 |
| di-haem oxidoreductase, putative peroxidase | SAMN05421512_111216 | Not Available | Positive | 4074919 - 4076343 | 51094.5 |
| repeat domain-containing protein | SAMN05421512_111217 | Not Available | Positive | 4076340 - 4078013 | 60745.1 |
| acetyl-coa c-acetyltransferase | SAMN05421512_111218 | Not Available | Negative | 4078010 - 4079140 | 38297.0 |
| long-chain acyl-coa synthetase | SAMN05421512_111219 | Not Available | Negative | 4079109 - 4080560 | 52480.3 |
| biotin transport system substrate-specific component | SAMN05421512_111220 | Not Available | Negative | 4080577 - 4081140 | 19408.8 |
| biotin transport system permease protein | SAMN05421512_111221 | Not Available | Negative | 4081137 - 4081778 | 22448.2 |
| biotin transport system atp-binding protein | SAMN05421512_111222 | Not Available | Negative | 4081775 - 4082503 | 26247.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
