Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Stappiaceae
Genus
Stappia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Stappiaceae |
| Genus | Stappia |
| Species | Stappia indica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
825960 bp
Thymine Count
819759 bp
Guanine Count
1662501 bp
Cytosine Count
1703840 bp
Genome Length
5015470 bp
Protein-coding Genes
4471 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| two-component system, ntrc family, c4-dicarboxylate transport response regulator dctd | SAMN05421512_111203 | Not Available | Negative | 4058322 - 4059677 | 49363.4 |
| two-component system, ntrc family, c4-dicarboxylate transport sensor histidine kinase dctb | SAMN05421512_111204 | Not Available | Negative | 4059727 - 4061529 | 64540.3 |
| choline dehydrogenase | SAMN05421512_111205 | Not Available | Negative | 4061606 - 4063213 | 58066.5 |
| uncharacterized membrane protein yebe, duf533 family | SAMN05421512_111206 | Not Available | Negative | 4063319 - 4064089 | 26042.8 |
| transcriptional regulator, asnc family | SAMN05421512_111207 | Not Available | Negative | 4064204 - 4064668 | 17209.6 |
| 4-hydroxyphenylpyruvate dioxygenase | SAMN05421512_111208 | Not Available | Positive | 4064798 - 4065910 | 41686.2 |
| trehalose 6-phosphate synthase | SAMN05421512_111209 | Not Available | Negative | 4065974 - 4067356 | 51192.0 |
| glucoamylase (glucan-1,4-alpha-glucosidase), gh15 family | SAMN05421512_111210 | Not Available | Negative | 4067488 - 4069284 | 67903.8 |
| trehalose 6-phosphatase | SAMN05421512_111211 | Not Available | Negative | 4069281 - 4070036 | 26520.9 |
| monosaccharide abc transporter atp-binding protein, cut2 family | SAMN05421512_111212 | Not Available | Negative | 4070120 - 4070905 | 27892.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
