Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Stappiaceae
Genus
Stappia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Stappiaceae |
| Genus | Stappia |
| Species | Stappia indica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
825960 bp
Thymine Count
819759 bp
Guanine Count
1662501 bp
Cytosine Count
1703840 bp
Genome Length
5015470 bp
Protein-coding Genes
4471 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aspartate/methionine/tyrosine aminotransferase | SAMN05421512_111173 | Not Available | Positive | 4024746 - 4025924 | 42236.0 |
| protease inhibitor inh | SAMN05421512_111174 | Not Available | Negative | 4025941 - 4026381 | 15134.3 |
| lactate dehydrogenase | SAMN05421512_111175 | Not Available | Negative | 4026531 - 4027499 | 34267.8 |
| transcriptional regulator, laci family | SAMN05421512_111176 | Not Available | Negative | 4027543 - 4028592 | 37271.5 |
| permease of the drug/metabolite transporter (dmt) superfamily | SAMN05421512_111177 | Not Available | Negative | 4028761 - 4029702 | 34747.5 |
| dna-binding transcriptional regulator, marr family | SAMN05421512_111178 | Not Available | Negative | 4029959 - 4030429 | 17455.0 |
| putative nadph-quinone reductase (modulator of drug activity b) | SAMN05421512_111179 | Not Available | Negative | 4030627 - 4031214 | 22675.6 |
| putative nadph-quinone reductase (modulator of drug activity b) | SAMN05421512_111180 | Not Available | Negative | 4031214 - 4031795 | 22016.0 |
| fad/fmn-containing dehydrogenase | SAMN05421512_111181 | Not Available | Negative | 4031806 - 4033206 | 51279.4 |
| cytosine deaminase | SAMN05421512_111182 | Not Available | Negative | 4033210 - 4034529 | 47984.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
