Stappia indica

rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Stappiaceae

Genus

Stappia

Description

Stappia indica is a Gram-negative, rod-shaped bacterium that thrives optimally at a temperature of 32.0°C. This microbe is characterized by its distinct morphological and physiological traits, which align with the broader characteristics typically attributed to the genus Stappia. As a Gram-negative organism, Stappia indica possesses a thin peptidoglycan layer surrounded by an outer membrane, which contributes to its structural integrity and influences its interactions with the environment. Given its optimal growth temperature, Stappia indica may be well-suited to mesophilic environments, potentially indicating a niche within temperate ecosystems where the ambient temperature fluctuates around this range. While specific ecological roles and interactions are not detailed, the thermal preference suggests that Stappia indica could play a role in nutrient cycling or organic matter degradation in habitats that experience moderate temperatures. Furthermore, the rod shape of Stappia indica may confer advantages in motility and surface adherence, which are essential traits for colonization and interaction with various substrates. This morphology may also facilitate the microbe's ability to thrive in diverse environments, potentially contributing to a dynamic ecological role within its habitat. Understanding the physiological and environmental preferences of Stappia indica can provide insights into its potential functional contributions to microbial communities and ecosystem processes.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyStappiaceae
GenusStappia
SpeciesStappia indica
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperature32
Temperature rangemesophilic
HabitatMarine
Biotic relationshipNot Available
Host(s)Homo sapiens
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Stappia indica strain USBA 352 genome assembly, contig:

Gene Summary

Adenine Count

825960 bp

Thymine Count

819759 bp

Guanine Count

1662501 bp

Cytosine Count

1703840 bp

Genome Length

5015470 bp

Protein-coding Genes

4471 genes

Non-Coding Genes

155 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
aspartate/methionine/tyrosine aminotransferaseSAMN05421512_111173Not AvailablePositive4024746 - 402592442236.0
protease inhibitor inhSAMN05421512_111174Not AvailableNegative4025941 - 402638115134.3
lactate dehydrogenaseSAMN05421512_111175Not AvailableNegative4026531 - 402749934267.8
transcriptional regulator, laci familySAMN05421512_111176Not AvailableNegative4027543 - 402859237271.5
permease of the drug/metabolite transporter (dmt) superfamilySAMN05421512_111177Not AvailableNegative4028761 - 402970234747.5
dna-binding transcriptional regulator, marr familySAMN05421512_111178Not AvailableNegative4029959 - 403042917455.0
putative nadph-quinone reductase (modulator of drug activity b)SAMN05421512_111179Not AvailableNegative4030627 - 403121422675.6
putative nadph-quinone reductase (modulator of drug activity b)SAMN05421512_111180Not AvailableNegative4031214 - 403179522016.0
fad/fmn-containing dehydrogenaseSAMN05421512_111181Not AvailableNegative4031806 - 403320651279.4
cytosine deaminaseSAMN05421512_111182Not AvailableNegative4033210 - 403452947984.4

Displaying genes 3741 – 3750 of 4626 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

Health ConditionRelationReference
Bacterial peritonitisCausesPMC8271035

Displaying health effects 1 – 1 of 1 in total