Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Stappiaceae
Genus
Stappia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Stappiaceae |
| Genus | Stappia |
| Species | Stappia indica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
825960 bp
Thymine Count
819759 bp
Guanine Count
1662501 bp
Cytosine Count
1703840 bp
Genome Length
5015470 bp
Protein-coding Genes
4471 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| n-formylglutamate amidohydrolase | SAMN05421512_111122 | Not Available | Positive | 3965622 - 3966512 | 33116.3 |
| myo-inositol-1(or 4)-monophosphatase | SAMN05421512_111124 | Not Available | Positive | 3967048 - 3967839 | 27842.2 |
| lysophospholipase | SAMN05421512_111125 | Not Available | Negative | 3967862 - 3968833 | 35054.0 |
| hypothetical protein | SAMN05421512_111126 | Not Available | Negative | 3969008 - 3969403 | 14149.2 |
| molecular chaperone ibpa | SAMN05421512_111127 | Not Available | Positive | 3969709 - 3970158 | 16710.8 |
| hypothetical protein | SAMN05421512_111128 | Not Available | Positive | 3970387 - 3971091 | 26154.6 |
| hypothetical protein | SAMN05421512_111129 | Not Available | Negative | 3971115 - 3971573 | 16802.1 |
| l-threonine aldolase | SAMN05421512_111130 | Not Available | Negative | 3971719 - 3972753 | 36715.4 |
| glutamate synthase (nadh) large subunit | SAMN05421512_111131 | Not Available | Positive | 3973398 - 3978134 | 172796.0 |
| glutamate synthase (nadh) small subunit | SAMN05421512_111132 | Not Available | Positive | 3978150 - 3979580 | 52392.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
