Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Stappiaceae
Genus
Stappia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Stappiaceae |
| Genus | Stappia |
| Species | Stappia indica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
825960 bp
Thymine Count
819759 bp
Guanine Count
1662501 bp
Cytosine Count
1703840 bp
Genome Length
5015470 bp
Protein-coding Genes
4471 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| d-alanine-d-alanine ligase | SAMN05421512_101215 | Not Available | Negative | 234196 - 235125 | 33390.1 |
| udp-n-acetylmuramate dehydrogenase | SAMN05421512_101216 | Not Available | Negative | 235118 - 236101 | 34898.7 |
| udp-n-acetylmuramate--l-alanine ligase | SAMN05421512_101217 | Not Available | Negative | 236098 - 237519 | 50461.1 |
| udp-n-acetylglucosamine-n- acetylmuramylpentapeptide n-acetylglucosamine transferase | SAMN05421512_101218 | Not Available | Negative | 237516 - 238661 | 39732.8 |
| cell division protein ftsw | SAMN05421512_101219 | Not Available | Negative | 238673 - 239830 | 41572.0 |
| udp-n-acetylmuramoylalanine--d-glutamate ligase | SAMN05421512_101220 | Not Available | Negative | 239830 - 241230 | 48559.8 |
| phospho-n-acetylmuramoyl-pentapeptide- transferase | SAMN05421512_101221 | Not Available | Negative | 241235 - 242320 | 38463.0 |
| udp-n-acetylmuramoylalanyl-d-glutamate--2, 6-diaminopimelate ligase /udp-n-acetylmuramoyl-tripeptide--d-alanyl-d-alanine ligase | SAMN05421512_101222 | Not Available | Negative | 242329 - 246312 | 140062.0 |
| cell division protein ftsi (penicillin-binding protein 3) | SAMN05421512_101223 | Not Available | Negative | 246395 - 248107 | 61950.0 |
| hypothetical protein | SAMN05421512_101224 | Not Available | Negative | 248117 - 248473 | 13245.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
