Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Stappiaceae
Genus
Stappia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Stappiaceae |
| Genus | Stappia |
| Species | Stappia indica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
825960 bp
Thymine Count
819759 bp
Guanine Count
1662501 bp
Cytosine Count
1703840 bp
Genome Length
5015470 bp
Protein-coding Genes
4471 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| predicted n-formylglutamate amidohydrolase | SAMN05421512_111112 | Not Available | Negative | 3957025 - 3957837 | 29459.9 |
| threonine/homoserine efflux transporter rhta | SAMN05421512_111113 | Not Available | Positive | 3958098 - 3959066 | 32872.9 |
| glycerate 2-kinase | SAMN05421512_111114 | Not Available | Positive | 3959063 - 3960379 | 45394.8 |
| uncharacterized membrane protein | SAMN05421512_111115 | Not Available | Positive | 3960413 - 3960907 | 18077.4 |
| pyruvate kinase | SAMN05421512_111116 | Not Available | Positive | 3960904 - 3962340 | 51344.9 |
| pimeloyl-acp methyl ester carboxylesterase | SAMN05421512_111117 | Not Available | Negative | 3962443 - 3963528 | 38229.5 |
| tetratricopeptide repeat-containing protein | SAMN05421512_111118 | Not Available | Negative | 3963595 - 3964260 | 24277.1 |
| lsu ribosomal protein l36p | SAMN05421512_111119 | Not Available | Negative | 3964351 - 3964476 | 4924.32 |
| Trna-val | Not Available | Not Available | Positive | 3964750 - 3964824 | Not Available |
| two-component system, cell cycle response regulator cpdr | SAMN05421512_111121 | Not Available | Negative | 3965002 - 3965361 | 13383.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
