Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Stappiaceae
Genus
Stappia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Stappiaceae |
| Genus | Stappia |
| Species | Stappia indica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
825960 bp
Thymine Count
819759 bp
Guanine Count
1662501 bp
Cytosine Count
1703840 bp
Genome Length
5015470 bp
Protein-coding Genes
4471 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| predicted unusual protein kinase regulating ubiquinone biosynthesis, aarf/abc1/ubib family | SAMN05421512_111102 | Not Available | Positive | 3948055 - 3949437 | 51284.3 |
| aa3 type cytochrome c oxidase subunit iv | SAMN05421512_111103 | Not Available | Positive | 3949602 - 3949886 | 9666.84 |
| nad(p) transhydrogenase subunit alpha | SAMN05421512_111104 | Not Available | Positive | 3949955 - 3951094 | 39459.8 |
| nad(p) transhydrogenase subunit alpha | SAMN05421512_111105 | Not Available | Positive | 3951106 - 3951582 | 16363.7 |
| nad(p) transhydrogenase subunit beta | SAMN05421512_111106 | Not Available | Positive | 3951596 - 3952993 | 47738.4 |
| diguanylate cyclase (ggdef) domain-containing protein | SAMN05421512_111107 | Not Available | Negative | 3953103 - 3955082 | 71112.5 |
| hypothetical protein | SAMN05421512_111108 | Not Available | Negative | 3955076 - 3955582 | 18476.3 |
| hypothetical protein | SAMN05421512_111109 | Not Available | Positive | 3955859 - 3956122 | 9209.28 |
| uncharacterized conserved protein, upf0335 family | SAMN05421512_111110 | Not Available | Negative | 3956232 - 3956495 | 9768.63 |
| hypothetical protein | SAMN05421512_111111 | Not Available | Negative | 3956671 - 3956976 | 11572.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
