Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Stappiaceae
Genus
Stappia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Stappiaceae |
| Genus | Stappia |
| Species | Stappia indica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
825960 bp
Thymine Count
819759 bp
Guanine Count
1662501 bp
Cytosine Count
1703840 bp
Genome Length
5015470 bp
Protein-coding Genes
4471 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 5-(carboxyamino)imidazole ribonucleotide synthase | SAMN05421512_11192 | Not Available | Positive | 3933462 - 3934565 | 39433.1 |
| multidrug resistance protein, mate family | SAMN05421512_11193 | Not Available | Negative | 3934579 - 3935967 | 49184.8 |
| ssu ribosomal protein s21p | SAMN05421512_11194 | Not Available | Positive | 3936469 - 3936696 | 8881.05 |
| tetratricopeptide repeat-containing protein | SAMN05421512_11195 | Not Available | Positive | 3936964 - 3937809 | 30080.1 |
| uncharacterized conserved protein ycbk, duf882 family | SAMN05421512_11196 | Not Available | Negative | 3938137 - 3939963 | 63580.8 |
| murein l,d-transpeptidase ycbb/ykud | SAMN05421512_11197 | Not Available | Negative | 3940217 - 3942214 | 71604.9 |
| dna-binding transcriptional response regulator, ntrc family, contains rec, aaa-type atpase, and a fis-type dna-binding domains | SAMN05421512_11198 | Not Available | Negative | 3942337 - 3943899 | 56687.9 |
| oligoendopeptidase f | SAMN05421512_11199 | Not Available | Positive | 3944105 - 3945967 | 68945.3 |
| protein of unknown function | SAMN05421512_111100 | Not Available | Positive | 3945964 - 3946944 | 35793.7 |
| 5'-nucleotidase | SAMN05421512_111101 | Not Available | Positive | 3946996 - 3947946 | 35069.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
