Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Stappiaceae
Genus
Stappia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Stappiaceae |
| Genus | Stappia |
| Species | Stappia indica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
825960 bp
Thymine Count
819759 bp
Guanine Count
1662501 bp
Cytosine Count
1703840 bp
Genome Length
5015470 bp
Protein-coding Genes
4471 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp-binding cassette, subfamily b | SAMN05421512_11182 | Not Available | Positive | 3922575 - 3924407 | 64590.1 |
| nad(p)-dependent dehydrogenase, short-chain alcohol dehydrogenase family | SAMN05421512_11183 | Not Available | Negative | 3924494 - 3925285 | 27542.9 |
| propionyl-coa synthetase | SAMN05421512_11184 | Not Available | Negative | 3925456 - 3927369 | 68624.5 |
| serine/threonine-protein kinase hipa | SAMN05421512_11185 | Not Available | Negative | 3927597 - 3928916 | 48702.5 |
| transcriptional regulator, xre family | SAMN05421512_11186 | Not Available | Negative | 3928916 - 3929176 | 9488.46 |
| hypothetical protein | SAMN05421512_11187 | Not Available | Positive | 3929356 - 3930120 | 27067.1 |
| fatty-acyl-coa synthase | SAMN05421512_11188 | Not Available | Positive | 3930238 - 3931875 | 60079.8 |
| hypothetical protein | SAMN05421512_11189 | Not Available | Negative | 3931980 - 3932159 | 6930.41 |
| hypothetical protein | SAMN05421512_11190 | Not Available | Positive | 3932560 - 3932781 | 8380.24 |
| 5-(carboxyamino)imidazole ribonucleotide mutase | SAMN05421512_11191 | Not Available | Positive | 3932945 - 3933442 | 17073.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
