Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Stappiaceae
Genus
Stappia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Stappiaceae |
| Genus | Stappia |
| Species | Stappia indica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
825960 bp
Thymine Count
819759 bp
Guanine Count
1662501 bp
Cytosine Count
1703840 bp
Genome Length
5015470 bp
Protein-coding Genes
4471 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| adenylosuccinate synthetase | SAMN05421512_11140 | Not Available | Positive | 3878633 - 3879922 | 46007.1 |
| hypothetical protein | SAMN05421512_11141 | Not Available | Positive | 3879983 - 3881749 | 61238.1 |
| d-3-phosphoglycerate dehydrogenase | SAMN05421512_11142 | Not Available | Negative | 3881883 - 3883469 | 55959.8 |
| phosphoserine aminotransferase apoenzyme | SAMN05421512_11143 | Not Available | Negative | 3883568 - 3884743 | 42181.2 |
| outer membrane insertion c-terminal signal | SAMN05421512_11145 | Not Available | Negative | 3885005 - 3885802 | 28496.7 |
| phosphoglucosamine mutase | SAMN05421512_11146 | Not Available | Negative | 3886075 - 3887421 | 48005.8 |
| membrane protease ftsh catalytic subunit | SAMN05421512_11147 | Not Available | Negative | 3887709 - 3889637 | 70145.6 |
| trna(ile)-lysidine synthase | SAMN05421512_11148 | Not Available | Negative | 3889767 - 3891104 | 46940.6 |
| tol-pal system protein ybgf | SAMN05421512_11149 | Not Available | Negative | 3891091 - 3892113 | 35587.2 |
| peptidoglycan-associated lipoprotein | SAMN05421512_11150 | Not Available | Negative | 3892320 - 3892805 | 17414.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
