Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Stappiaceae
Genus
Stappia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Stappiaceae |
| Genus | Stappia |
| Species | Stappia indica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
825960 bp
Thymine Count
819759 bp
Guanine Count
1662501 bp
Cytosine Count
1703840 bp
Genome Length
5015470 bp
Protein-coding Genes
4471 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| response regulator receiver protein | SAMN05421512_11130 | Not Available | Positive | 3868306 - 3868671 | 13745.7 |
| two-component system, chemotaxis family, response regulator cheb | SAMN05421512_11131 | Not Available | Positive | 3868694 - 3869902 | 41812.7 |
| mcp methyltransferase, cher-type | SAMN05421512_11132 | Not Available | Positive | 3869899 - 3870762 | 32290.4 |
| Trna-glu | Not Available | Not Available | Positive | 3870979 - 3871054 | Not Available |
| hypothetical protein | SAMN05421512_11134 | Not Available | Negative | 3871278 - 3871637 | 12677.5 |
| ribosomal large subunit pseudouridine synthase d | SAMN05421512_11135 | Not Available | Positive | 3871642 - 3872673 | 37021.1 |
| rna polymerase, sigma 32 subunit, rpoh | SAMN05421512_11136 | Not Available | Positive | 3872832 - 3873734 | 34248.9 |
| adenylate/guanylate cyclase | SAMN05421512_11137 | Not Available | Positive | 3873884 - 3876082 | 78365.2 |
| eama domain-containing membrane protein rard | SAMN05421512_11138 | Not Available | Negative | 3876079 - 3877023 | 32650.3 |
| predicted arabinose efflux permease, mfs family | SAMN05421512_11139 | Not Available | Positive | 3877202 - 3878470 | 44239.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
