Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Stappiaceae
Genus
Stappia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Stappiaceae |
| Genus | Stappia |
| Species | Stappia indica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
825960 bp
Thymine Count
819759 bp
Guanine Count
1662501 bp
Cytosine Count
1703840 bp
Genome Length
5015470 bp
Protein-coding Genes
4471 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tigr02300 family protein | SAMN05421512_110200 | Not Available | Negative | 3807964 - 3808359 | 14255.8 |
| 3-phosphoshikimate 1-carboxyvinyltransferase | SAMN05421512_110201 | Not Available | Positive | 3808625 - 3809980 | 46793.1 |
| cytidylate kinase | SAMN05421512_110202 | Not Available | Positive | 3809977 - 3810603 | 22293.5 |
| ssu ribosomal protein s1p | SAMN05421512_110203 | Not Available | Positive | 3810959 - 3812668 | 62976.9 |
| uncharacterized conserved protein yeao, duf488 family | SAMN05421512_110204 | Not Available | Negative | 3812816 - 3813202 | 13881.5 |
| signal peptide peptidase a. serine peptidase. merops family s49 | SAMN05421512_110205 | Not Available | Positive | 3813609 - 3814616 | 35826.0 |
| integration host factor subunit beta | SAMN05421512_110206 | Not Available | Positive | 3814613 - 3814924 | 11776.7 |
| protein of unknown function | SAMN05421512_110207 | Not Available | Positive | 3815071 - 3815418 | 12538.3 |
| uncharacterized membrane protein yeih | SAMN05421512_110208 | Not Available | Negative | 3815511 - 3816149 | 22110.5 |
| dna-binding transcriptional regulator, marr family | SAMN05421512_110209 | Not Available | Positive | 3816276 - 3816698 | 15393.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
