Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Stappiaceae
Genus
Stappia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Stappiaceae |
| Genus | Stappia |
| Species | Stappia indica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
825960 bp
Thymine Count
819759 bp
Guanine Count
1662501 bp
Cytosine Count
1703840 bp
Genome Length
5015470 bp
Protein-coding Genes
4471 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| two-component system, ompr family, kdp operon response regulator kdpe | SAMN05421512_110190 | Not Available | Negative | 3790669 - 3791361 | 25790.3 |
| two-component system, ompr family, sensor histidine kinase kdpd | SAMN05421512_110191 | Not Available | Negative | 3791358 - 3794078 | 99520.6 |
| k+-transporting atpase atpase c chain | SAMN05421512_110192 | Not Available | Negative | 3794303 - 3794887 | 19811.5 |
| k+-transporting atpase atpase a chain | SAMN05421512_110193 | Not Available | Negative | 3794887 - 3796569 | 59327.3 |
| k+-transporting atpase atpase b chain | SAMN05421512_110194 | Not Available | Negative | 3796692 - 3798764 | 72249.4 |
| k+-transporting atpase, kdpf subunit | SAMN05421512_110195 | Not Available | Negative | 3798962 - 3799051 | 3263.09 |
| hypothetical protein | SAMN05421512_110196 | Not Available | Negative | 3799314 - 3800132 | 30961.1 |
| branched chain amino acid aminotransferase apoenzyme | SAMN05421512_110197 | Not Available | Positive | 3800325 - 3801320 | 36658.0 |
| part of aaa domain-containing protein | SAMN05421512_110198 | Not Available | Positive | 3801626 - 3807550 | 219007.0 |
| Trna-ala | Not Available | Not Available | Positive | 3807691 - 3807766 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
