Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Stappiaceae
Genus
Stappia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Stappiaceae |
| Genus | Stappia |
| Species | Stappia indica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
825960 bp
Thymine Count
819759 bp
Guanine Count
1662501 bp
Cytosine Count
1703840 bp
Genome Length
5015470 bp
Protein-coding Genes
4471 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| methyl-accepting chemotaxis protein | SAMN05421512_110170 | Not Available | Positive | 3770102 - 3771787 | 59480.1 |
| catechol 2,3-dioxygenase | SAMN05421512_110171 | Not Available | Negative | 3771913 - 3772350 | 15991.1 |
| gluconate 5-dehydrogenase | SAMN05421512_110172 | Not Available | Negative | 3772370 - 3773146 | 26635.4 |
| pyruvate dehydrogenase e2 component (dihydrolipoamide acetyltransferase) | SAMN05421512_110173 | Not Available | Negative | 3773148 - 3774386 | 42730.7 |
| 2-oxoisovalerate dehydrogenase e1 component | SAMN05421512_110174 | Not Available | Negative | 3774390 - 3776468 | 73639.2 |
| lysr family transcriptional regulator, nitrogen assimilation regulatory protein | SAMN05421512_110175 | Not Available | Negative | 3776681 - 3777610 | 33763.9 |
| amino acid/amide abc transporter substrate-binding protein, haat family | SAMN05421512_110176 | Not Available | Positive | 3777898 - 3779103 | 42978.9 |
| amino acid/amide abc transporter atp-binding protein 1, haat family | SAMN05421512_110177 | Not Available | Positive | 3779115 - 3779879 | 28085.1 |
| amino acid/amide abc transporter atp-binding protein 2, haat family | SAMN05421512_110178 | Not Available | Positive | 3779879 - 3780592 | 25937.6 |
| amino acid/amide abc transporter membrane protein 1, haat family | SAMN05421512_110179 | Not Available | Positive | 3780595 - 3781479 | 31509.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
