Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Stappiaceae
Genus
Stappia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Stappiaceae |
| Genus | Stappia |
| Species | Stappia indica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
825960 bp
Thymine Count
819759 bp
Guanine Count
1662501 bp
Cytosine Count
1703840 bp
Genome Length
5015470 bp
Protein-coding Genes
4471 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05421512_110150 | Not Available | Positive | 3752801 - 3753985 | 42090.2 |
| putative (di)nucleoside polyphosphate hydrolase | SAMN05421512_110151 | Not Available | Positive | 3754050 - 3754550 | 18819.2 |
| nad(p)-dependent dehydrogenase, short-chain alcohol dehydrogenase family | SAMN05421512_110152 | Not Available | Positive | 3754754 - 3755518 | 26573.1 |
| epoxyqueuosine reductase | SAMN05421512_110153 | Not Available | Negative | 3755521 - 3756633 | 40150.8 |
| glutathione s-transferase | SAMN05421512_110154 | Not Available | Negative | 3756702 - 3757394 | 26156.2 |
| undecaprenyl-diphosphatase | SAMN05421512_110155 | Not Available | Positive | 3757542 - 3758348 | 28926.0 |
| predicted dna-binding transcriptional regulator yafy, contains an hth and wyl domains | SAMN05421512_110156 | Not Available | Negative | 3758331 - 3759356 | 37964.7 |
| protein of unknown function | SAMN05421512_110157 | Not Available | Positive | 3759523 - 3759897 | 14149.0 |
| nadh dehydrogenase | SAMN05421512_110158 | Not Available | Negative | 3759991 - 3760995 | 35860.6 |
| Trna-leu | Not Available | Not Available | Positive | 3761310 - 3761396 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
