Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Stappiaceae
Genus
Stappia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Stappiaceae |
| Genus | Stappia |
| Species | Stappia indica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
825960 bp
Thymine Count
819759 bp
Guanine Count
1662501 bp
Cytosine Count
1703840 bp
Genome Length
5015470 bp
Protein-coding Genes
4471 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nadph:quinone reductase | SAMN05421512_110130 | Not Available | Negative | 3730033 - 3731061 | 35813.3 |
| acyl-coa dehydrogenase | SAMN05421512_110131 | Not Available | Negative | 3731067 - 3732239 | 42778.3 |
| 2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-coa isomerase | SAMN05421512_110132 | Not Available | Negative | 3732324 - 3733187 | 29791.8 |
| 3-methylcrotonyl-coa carboxylase beta subunit | SAMN05421512_110133 | Not Available | Positive | 3733339 - 3734883 | 54963.0 |
| 3-methylcrotonyl-coa carboxylase alpha subunit | SAMN05421512_110134 | Not Available | Positive | 3734892 - 3736874 | 69904.5 |
| 2,4-dienoyl-coa reductase | SAMN05421512_110135 | Not Available | Positive | 3737131 - 3738231 | 39048.7 |
| diguanylate cyclase/phosphodiesterase | SAMN05421512_110136 | Not Available | Negative | 3738277 - 3740691 | 86648.5 |
| Trna-ser | Not Available | Not Available | Positive | 3741114 - 3741203 | Not Available |
| lsu ribosomal protein l21p | SAMN05421512_110138 | Not Available | Positive | 3741757 - 3742377 | 22190.7 |
| lsu ribosomal protein l27p | SAMN05421512_110139 | Not Available | Positive | 3742426 - 3742695 | 9402.32 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
