Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Stappiaceae
Genus
Stappia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Stappiaceae |
| Genus | Stappia |
| Species | Stappia indica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
825960 bp
Thymine Count
819759 bp
Guanine Count
1662501 bp
Cytosine Count
1703840 bp
Genome Length
5015470 bp
Protein-coding Genes
4471 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05421512_110120 | Not Available | Negative | 3717141 - 3717464 | 11239.4 |
| hypothetical protein | SAMN05421512_110121 | Not Available | Negative | 3717461 - 3717880 | 14744.7 |
| sapc protein | SAMN05421512_110122 | Not Available | Positive | 3718053 - 3718820 | 28142.1 |
| invasion protein ialb, involved in pathogenesis | SAMN05421512_110123 | Not Available | Negative | 3718922 - 3719464 | 18700.7 |
| ammonium transporter, amt family | SAMN05421512_110124 | Not Available | Positive | 3719828 - 3723136 | 117830.0 |
| transcriptional regulator, tetr family | SAMN05421512_110125 | Not Available | Positive | 3723241 - 3723849 | 21822.1 |
| membrane fusion protein, multidrug efflux system | SAMN05421512_110126 | Not Available | Positive | 3723846 - 3725012 | 41371.3 |
| multidrug efflux pump | SAMN05421512_110127 | Not Available | Positive | 3725131 - 3728319 | 113228.0 |
| threonine/homoserine/homoserine lactone efflux protein | SAMN05421512_110128 | Not Available | Positive | 3728788 - 3729420 | 22257.7 |
| transcriptional regulator, tetr family | SAMN05421512_110129 | Not Available | Negative | 3729428 - 3730066 | 23583.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
