Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Stappiaceae
Genus
Stappia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Stappiaceae |
| Genus | Stappia |
| Species | Stappia indica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
825960 bp
Thymine Count
819759 bp
Guanine Count
1662501 bp
Cytosine Count
1703840 bp
Genome Length
5015470 bp
Protein-coding Genes
4471 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| urocanate hydratase | SAMN05421512_110110 | Not Available | Positive | 3694483 - 3696156 | 61196.9 |
| trap-type mannitol/chloroaromatic compound transport system, substrate-binding protein | SAMN05421512_110111 | Not Available | Positive | 3696239 - 3697336 | 39377.8 |
| trap-type mannitol/chloroaromatic compound transport system, small permease component | SAMN05421512_110112 | Not Available | Positive | 3697468 - 3698007 | 19457.3 |
| trap transporter, dctm subunit | SAMN05421512_110113 | Not Available | Positive | 3698007 - 3699557 | 53836.2 |
| ureidoglycolate lyase | SAMN05421512_110114 | Not Available | Negative | 3699574 - 3700065 | 18120.9 |
| right handed beta helix region | SAMN05421512_110115 | Not Available | Positive | 3700539 - 3714551 | 455466.0 |
| microcystin-dependent protein | SAMN05421512_110116 | Not Available | Positive | 3714873 - 3715373 | 17760.1 |
| microcystin-dependent protein | SAMN05421512_110117 | Not Available | Positive | 3715408 - 3715935 | 18542.8 |
| microcystin-dependent protein | SAMN05421512_110118 | Not Available | Positive | 3715946 - 3716476 | 18719.2 |
| ribosomal protein s18 acetylase rimi | SAMN05421512_110119 | Not Available | Positive | 3716511 - 3717089 | 21320.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
