Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Stappiaceae
Genus
Stappia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Stappiaceae |
| Genus | Stappia |
| Species | Stappia indica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
825960 bp
Thymine Count
819759 bp
Guanine Count
1662501 bp
Cytosine Count
1703840 bp
Genome Length
5015470 bp
Protein-coding Genes
4471 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05421512_110100 | Not Available | Negative | 3682628 - 3683137 | 18299.9 |
| diguanylate cyclase/phosphodiesterase | SAMN05421512_110101 | Not Available | Negative | 3683369 - 3685456 | 74981.1 |
| dna-binding transcriptional regulator, marr family | SAMN05421512_110102 | Not Available | Negative | 3685612 - 3686088 | 17191.8 |
| 2-polyprenyl-6-methoxyphenol hydroxylase | SAMN05421512_110103 | Not Available | Negative | 3686091 - 3687359 | 46568.9 |
| trap-type c4-dicarboxylate transport system, substrate-binding protein | SAMN05421512_110104 | Not Available | Negative | 3687423 - 3688457 | 36886.4 |
| transcriptional regulator, gntr family | SAMN05421512_110105 | Not Available | Negative | 3688659 - 3689405 | 28257.2 |
| formimidoylglutamate deiminase | SAMN05421512_110106 | Not Available | Negative | 3689405 - 3690778 | 49455.5 |
| imidazolonepropionase | SAMN05421512_110107 | Not Available | Positive | 3690892 - 3692124 | 42589.9 |
| histidine ammonia-lyase | SAMN05421512_110108 | Not Available | Positive | 3692124 - 3693671 | 53730.2 |
| formiminoglutamase | SAMN05421512_110109 | Not Available | Positive | 3693668 - 3694486 | 29395.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
