Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Stappiaceae
Genus
Stappia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Stappiaceae |
| Genus | Stappia |
| Species | Stappia indica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
825960 bp
Thymine Count
819759 bp
Guanine Count
1662501 bp
Cytosine Count
1703840 bp
Genome Length
5015470 bp
Protein-coding Genes
4471 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| precorrin-2/cobalt-factor-2 c20-methyltransferase | SAMN05421512_11090 | Not Available | Negative | 3671966 - 3672694 | 25904.5 |
| precorrin-6y c5,15-methyltransferase (decarboxylating) | SAMN05421512_11091 | Not Available | Negative | 3672691 - 3673917 | 42235.2 |
| precorrin-8x methylmutase | SAMN05421512_11092 | Not Available | Negative | 3673914 - 3674567 | 22680.4 |
| sirohydrochlorin cobaltochelatase | SAMN05421512_11093 | Not Available | Negative | 3674578 - 3675765 | 44142.7 |
| hypothetical protein | SAMN05421512_11094 | Not Available | Positive | 3676215 - 3676739 | 19115.8 |
| glycine cleavage system regulatory protein | SAMN05421512_11095 | Not Available | Positive | 3676829 - 3677353 | 18238.8 |
| hypothetical protein | SAMN05421512_11096 | Not Available | Negative | 3677377 - 3678519 | 39959.4 |
| hypothetical protein | SAMN05421512_11097 | Not Available | Negative | 3678500 - 3679651 | 40110.9 |
| cxxc motif-containing protein, duf1111 family | SAMN05421512_11098 | Not Available | Negative | 3679693 - 3681195 | 53618.2 |
| imelysin. metallo peptidase. merops family m75 | SAMN05421512_11099 | Not Available | Negative | 3681302 - 3682573 | 44857.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
