Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Stappiaceae
Genus
Stappia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Stappiaceae |
| Genus | Stappia |
| Species | Stappia indica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
825960 bp
Thymine Count
819759 bp
Guanine Count
1662501 bp
Cytosine Count
1703840 bp
Genome Length
5015470 bp
Protein-coding Genes
4471 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative polymerase | SAMN05421512_11080 | Not Available | Negative | 3660111 - 3661400 | 47485.9 |
| uncharacterized protein involved in exopolysaccharide biosynthesis | SAMN05421512_11081 | Not Available | Negative | 3661381 - 3663393 | 72434.7 |
| alpha-1,3-mannosyltransferase | SAMN05421512_11082 | Not Available | Positive | 3663647 - 3664420 | 28005.0 |
| precorrin-6a/cobalt-precorrin-6a reductase | SAMN05421512_11083 | Not Available | Negative | 3664427 - 3665173 | 26050.5 |
| cobalt-precorrin-5b (c1)-methyltransferase | SAMN05421512_11084 | Not Available | Negative | 3665170 - 3666252 | 36621.0 |
| uroporphyrinogen-iii c-methyltransferase | SAMN05421512_11085 | Not Available | Positive | 3666319 - 3667317 | 34775.9 |
| cobyrinic acid a,c-diamide synthase | SAMN05421512_11086 | Not Available | Positive | 3667319 - 3668632 | 45557.5 |
| methyltransferase domain-containing protein | SAMN05421512_11087 | Not Available | Negative | 3668683 - 3669309 | 22370.5 |
| precorrin-4/cobalt-precorrin-4 c11-methyltransferase | SAMN05421512_11088 | Not Available | Negative | 3669394 - 3670179 | 28140.1 |
| cobalt-precorrin 5a hydrolase / precorrin-3b c17-methyltransferase | SAMN05421512_11089 | Not Available | Negative | 3670176 - 3671996 | 62836.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
