Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Stappiaceae
Genus
Stappia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Stappiaceae |
| Genus | Stappia |
| Species | Stappia indica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
825960 bp
Thymine Count
819759 bp
Guanine Count
1662501 bp
Cytosine Count
1703840 bp
Genome Length
5015470 bp
Protein-coding Genes
4471 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acyl-coa dehydrogenase | SAMN05421512_11070 | Not Available | Positive | 3646514 - 3647695 | 41947.6 |
| seryl-trna synthetase | SAMN05421512_11071 | Not Available | Positive | 3647709 - 3648620 | 33542.1 |
| succinylarginine dihydrolase | SAMN05421512_11072 | Not Available | Positive | 3648623 - 3649630 | 37247.3 |
| beta-mannosidase | SAMN05421512_11073 | Not Available | Positive | 3649671 - 3652148 | 88938.6 |
| serine aminopeptidase, s33 | SAMN05421512_11074 | Not Available | Negative | 3652133 - 3653944 | 62303.3 |
| cellulase family 5 | SAMN05421512_11075 | Not Available | Negative | 3653920 - 3654972 | 38970.3 |
| membrane protein involved in the export of o-antigen and teichoic acid | SAMN05421512_11076 | Not Available | Negative | 3654959 - 3656347 | 50646.8 |
| glycosyltransferase involved in cell wall bisynthesis | SAMN05421512_11077 | Not Available | Negative | 3656344 - 3657564 | 43772.3 |
| peptidoglycan/xylan/chitin deacetylase, pgda/cda1 family | SAMN05421512_11078 | Not Available | Positive | 3657893 - 3659002 | 41108.3 |
| alpha-1,3-mannosyltransferase | SAMN05421512_11079 | Not Available | Positive | 3658999 - 3660144 | 41112.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
