Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Stappiaceae
Genus
Stappia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Stappiaceae |
| Genus | Stappia |
| Species | Stappia indica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
825960 bp
Thymine Count
819759 bp
Guanine Count
1662501 bp
Cytosine Count
1703840 bp
Genome Length
5015470 bp
Protein-coding Genes
4471 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| crotonobetainyl-coa:carnitine coa-transferase caib | SAMN05421512_11060 | Not Available | Negative | 3636811 - 3638103 | 45768.1 |
| hypothetical protein | SAMN05421512_11061 | Not Available | Negative | 3638149 - 3638643 | 17750.2 |
| membrane glycosyltransferase | SAMN05421512_11062 | Not Available | Negative | 3638800 - 3640692 | 68469.0 |
| 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide a dehydrogenase | SAMN05421512_11063 | Not Available | Positive | 3640783 - 3641811 | 36559.8 |
| 6-pyruvoyl-tetrahydropterin synthase | SAMN05421512_11064 | Not Available | Positive | 3641942 - 3642340 | 14806.5 |
| glycosyltransferase involved in cell wall bisynthesis | SAMN05421512_11065 | Not Available | Positive | 3642340 - 3643410 | 37066.6 |
| hypothetical protein | SAMN05421512_11066 | Not Available | Positive | 3643407 - 3644222 | 28596.8 |
| pilz domain-containing protein | SAMN05421512_11067 | Not Available | Negative | 3644236 - 3644526 | 10915.2 |
| 3-oxoadipyl-coa thiolase | SAMN05421512_11068 | Not Available | Negative | 3644668 - 3645873 | 41619.1 |
| acyl carrier protein | SAMN05421512_11069 | Not Available | Positive | 3646257 - 3646514 | 9064.89 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
