Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Stappiaceae
Genus
Stappia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Stappiaceae |
| Genus | Stappia |
| Species | Stappia indica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
825960 bp
Thymine Count
819759 bp
Guanine Count
1662501 bp
Cytosine Count
1703840 bp
Genome Length
5015470 bp
Protein-coding Genes
4471 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trka-c domain-containing protein | SAMN05421512_11030 | Not Available | Negative | 3604223 - 3606220 | 69357.0 |
| ubiquinone/menaquinone biosynthesis c-methylase ubie | SAMN05421512_11031 | Not Available | Positive | 3606422 - 3607435 | 37523.6 |
| para-aminobenzoate synthetase / 4-amino-4-deoxychorismate lyase | SAMN05421512_11032 | Not Available | Positive | 3607551 - 3609428 | 67111.0 |
| hypothetical protein | SAMN05421512_11033 | Not Available | Negative | 3609356 - 3610378 | 37227.7 |
| phenylalanyl-trna synthetase beta subunit | SAMN05421512_11034 | Not Available | Negative | 3610513 - 3612933 | 86367.6 |
| hypothetical protein | SAMN05421512_11035 | Not Available | Negative | 3613004 - 3613678 | 24410.4 |
| phenylalanyl-trna synthetase, alpha subunit | SAMN05421512_11036 | Not Available | Negative | 3613675 - 3614757 | 40330.4 |
| hemin uptake protein hemp | SAMN05421512_11037 | Not Available | Negative | 3615261 - 3615503 | 9053.86 |
| hypothetical protein | SAMN05421512_11038 | Not Available | Positive | 3615812 - 3617116 | 47751.7 |
| heme-degrading monooxygenase hmoa | SAMN05421512_11039 | Not Available | Positive | 3617116 - 3617430 | 12157.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
