Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Stappiaceae
Genus
Stappia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Stappiaceae |
| Genus | Stappia |
| Species | Stappia indica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
825960 bp
Thymine Count
819759 bp
Guanine Count
1662501 bp
Cytosine Count
1703840 bp
Genome Length
5015470 bp
Protein-coding Genes
4471 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lsu ribosomal protein l20p | SAMN05421512_11020 | Not Available | Positive | 3597194 - 3597553 | 13524.7 |
| transcriptional regulator, lysr family | SAMN05421512_11021 | Not Available | Negative | 3597860 - 3598756 | 32419.2 |
| methyltransferase domain-containing protein | SAMN05421512_11022 | Not Available | Positive | 3598859 - 3599497 | 22985.0 |
| transcriptional regulator, tetr family | SAMN05421512_11023 | Not Available | Negative | 3599514 - 3600107 | 21083.2 |
| cupin domain-containing protein | SAMN05421512_11024 | Not Available | Positive | 3600216 - 3600680 | 16049.4 |
| signal transduction histidine kinase | SAMN05421512_11025 | Not Available | Negative | 3600709 - 3602142 | 50440.5 |
| dna-binding response regulator, ompr family, contains rec and winged-helix (whth) domain | SAMN05421512_11026 | Not Available | Negative | 3602139 - 3602804 | 24234.3 |
| uncharacterized membrane protein ykoi | SAMN05421512_11027 | Not Available | Negative | 3602804 - 3603139 | 12384.8 |
| peptidase propeptide and ypeb domain-containing protein | SAMN05421512_11028 | Not Available | Positive | 3603277 - 3603579 | 11009.9 |
| cytochrome b | SAMN05421512_11029 | Not Available | Positive | 3603576 - 3604175 | 21392.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
