Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Stappiaceae
Genus
Stappia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Stappiaceae |
| Genus | Stappia |
| Species | Stappia indica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
825960 bp
Thymine Count
819759 bp
Guanine Count
1662501 bp
Cytosine Count
1703840 bp
Genome Length
5015470 bp
Protein-coding Genes
4471 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cold shock protein, cspa family | SAMN05421512_1109 | Not Available | Negative | 3584672 - 3584872 | 7327.8 |
| radical sam superfamily enzyme ygiq, upf0313 family | SAMN05421512_11010 | Not Available | Positive | 3585314 - 3586921 | 59635.6 |
| gtp-binding protein lepa | SAMN05421512_11011 | Not Available | Negative | 3586941 - 3588746 | 66586.6 |
| penicillin-insensitive murein endopeptidase | SAMN05421512_11012 | Not Available | Negative | 3588869 - 3590176 | 46141.7 |
| patatin-like phospholipase/acyl hydrolase | SAMN05421512_11013 | Not Available | Negative | 3590327 - 3591364 | 38057.6 |
| pimeloyl-acp methyl ester carboxylesterase | SAMN05421512_11014 | Not Available | Negative | 3591551 - 3592363 | 29595.3 |
| glycosyltransferase involved in cell wall bisynthesis | SAMN05421512_11015 | Not Available | Positive | 3592483 - 3593655 | 41073.4 |
| methyl-accepting chemotaxis sensory transducer | SAMN05421512_11016 | Not Available | Negative | 3593686 - 3595662 | 68981.8 |
| bacterial translation initiation factor 3 (bif-3) | SAMN05421512_11017 | Not Available | Positive | 3596234 - 3596638 | 15475.9 |
| lsu ribosomal protein l35p | SAMN05421512_11019 | Not Available | Positive | 3596957 - 3597154 | 7187.06 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
