Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Stappiaceae
Genus
Stappia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Stappiaceae |
| Genus | Stappia |
| Species | Stappia indica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
825960 bp
Thymine Count
819759 bp
Guanine Count
1662501 bp
Cytosine Count
1703840 bp
Genome Length
5015470 bp
Protein-coding Genes
4471 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-3-methyladenine glycosylase i | SAMN05421512_109252 | Not Available | Positive | 3574100 - 3574780 | 25484.9 |
| transposase is116/is110/is902 family protein | SAMN05421512_109253 | Not Available | Negative | 3575333 - 3575667 | 11740.7 |
| 23s rrna (cytosine1962-c5)-methyltransferase | SAMN05421512_1101 | Not Available | Positive | 3575987 - 3576994 | 37137.6 |
| rna methyltransferase, trmh family | SAMN05421512_1102 | Not Available | Positive | 3576991 - 3577839 | 30012.2 |
| nucleoside-diphosphate-sugar epimerase | SAMN05421512_1103 | Not Available | Positive | 3577865 - 3578731 | 31588.1 |
| protein of unknown function | SAMN05421512_1104 | Not Available | Negative | 3578741 - 3579517 | 27296.7 |
| eama-like transporter family protein | SAMN05421512_1105 | Not Available | Negative | 3579627 - 3580547 | 31217.7 |
| transcriptional regulator, marr family with acetyltransferase activity | SAMN05421512_1106 | Not Available | Negative | 3580544 - 3581482 | 34935.8 |
| glycerol kinase | SAMN05421512_1107 | Not Available | Negative | 3581647 - 3583143 | 54019.6 |
| predicted arabinose efflux permease, mfs family | SAMN05421512_1108 | Not Available | Positive | 3583352 - 3584551 | 40909.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
