Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Stappiaceae
Genus
Stappia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Stappiaceae |
| Genus | Stappia |
| Species | Stappia indica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
825960 bp
Thymine Count
819759 bp
Guanine Count
1662501 bp
Cytosine Count
1703840 bp
Genome Length
5015470 bp
Protein-coding Genes
4471 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trap transporter, dctm subunit | SAMN05421512_109242 | Not Available | Positive | 3561960 - 3563342 | 49205.7 |
| uncharacterized membrane-anchored protein | SAMN05421512_109243 | Not Available | Positive | 3563449 - 3564804 | 49573.2 |
| cytochrome c | SAMN05421512_109244 | Not Available | Negative | 3564928 - 3565326 | 13927.7 |
| transcriptional regulator, lysr family | SAMN05421512_109245 | Not Available | Negative | 3565638 - 3566651 | 37061.5 |
| glycolate oxidase | SAMN05421512_109246 | Not Available | Positive | 3566835 - 3568331 | 53592.0 |
| glycolate oxidase fad binding subunit | SAMN05421512_109247 | Not Available | Positive | 3568407 - 3569624 | 42132.5 |
| glycolate oxidase iron-sulfur subunit | SAMN05421512_109248 | Not Available | Positive | 3569626 - 3570975 | 47998.4 |
| l,d-transpeptidase catalytic domain | SAMN05421512_109249 | Not Available | Negative | 3571067 - 3571792 | 26848.8 |
| protein of unknown function | SAMN05421512_109250 | Not Available | Negative | 3572007 - 3572741 | 27681.8 |
| chemotaxis protein chez | SAMN05421512_109251 | Not Available | Positive | 3572962 - 3573681 | 26183.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
