Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Stappiaceae
Genus
Stappia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Stappiaceae |
| Genus | Stappia |
| Species | Stappia indica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
825960 bp
Thymine Count
819759 bp
Guanine Count
1662501 bp
Cytosine Count
1703840 bp
Genome Length
5015470 bp
Protein-coding Genes
4471 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| eama-like transporter family protein | SAMN05421512_109232 | Not Available | Negative | 3552774 - 3553757 | 34621.1 |
| hypothetical protein | SAMN05421512_109233 | Not Available | Negative | 3553836 - 3554093 | 9921.5 |
| hypothetical protein | SAMN05421512_109234 | Not Available | Negative | 3554236 - 3554868 | 23316.9 |
| thioredoxin-related protein | SAMN05421512_109235 | Not Available | Negative | 3554876 - 3555508 | 23819.0 |
| l-lactate dehydrogenase complex protein lldg | SAMN05421512_109236 | Not Available | Negative | 3555597 - 3556277 | 23961.8 |
| l-lactate dehydrogenase complex protein lldf | SAMN05421512_109237 | Not Available | Negative | 3556274 - 3557725 | 52990.6 |
| l-lactate dehydrogenase complex protein llde | SAMN05421512_109238 | Not Available | Negative | 3557764 - 3558582 | 28937.8 |
| transcriptional regulator, gntr family | SAMN05421512_109239 | Not Available | Negative | 3558579 - 3559448 | 32658.9 |
| trap-type mannitol/chloroaromatic compound transport system, substrate-binding protein | SAMN05421512_109240 | Not Available | Positive | 3559773 - 3560819 | 37778.1 |
| trap-type mannitol/chloroaromatic compound transport system, small permease component | SAMN05421512_109241 | Not Available | Positive | 3560981 - 3561943 | 35128.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
