Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Stappiaceae
Genus
Stappia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Stappiaceae |
| Genus | Stappia |
| Species | Stappia indica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
825960 bp
Thymine Count
819759 bp
Guanine Count
1662501 bp
Cytosine Count
1703840 bp
Genome Length
5015470 bp
Protein-coding Genes
4471 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trap transporter, dctm subunit | SAMN05421512_109222 | Not Available | Positive | 3541372 - 3542739 | 47916.6 |
| exodeoxyribonuclease vii large subunit | SAMN05421512_109223 | Not Available | Negative | 3543185 - 3544660 | 52899.9 |
| 16s rrna (uracil1498-n3)-methyltransferase | SAMN05421512_109224 | Not Available | Positive | 3544779 - 3545531 | 27232.9 |
| glutamate--cysteine ligase | SAMN05421512_109225 | Not Available | Positive | 3545630 - 3547036 | 51634.4 |
| hypothetical protein | SAMN05421512_109226 | Not Available | Positive | 3547119 - 3547883 | 26744.8 |
| his kinase a (phospho-acceptor) domain-containing protein | SAMN05421512_109227 | Not Available | Negative | 3547900 - 3548880 | 34914.3 |
| two-component system, ompr family, response regulator | SAMN05421512_109228 | Not Available | Negative | 3548877 - 3549554 | 24438.5 |
| protein of unknown function | SAMN05421512_109229 | Not Available | Negative | 3549532 - 3551103 | 56248.1 |
| protein of unknown function | SAMN05421512_109230 | Not Available | Negative | 3551342 - 3551650 | 11003.3 |
| dna-binding transcriptional regulator, lysr family | SAMN05421512_109231 | Not Available | Positive | 3551879 - 3552766 | 31993.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
