Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Stappiaceae
Genus
Stappia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Stappiaceae |
| Genus | Stappia |
| Species | Stappia indica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
825960 bp
Thymine Count
819759 bp
Guanine Count
1662501 bp
Cytosine Count
1703840 bp
Genome Length
5015470 bp
Protein-coding Genes
4471 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05421512_109212 | Not Available | Positive | 3527768 - 3528148 | 14336.4 |
| acetolactate synthase-1/2/3 large subunit | SAMN05421512_109213 | Not Available | Positive | 3528273 - 3529946 | 59858.9 |
| acetyltransferase | SAMN05421512_109214 | Not Available | Negative | 3529979 - 3532690 | 95395.2 |
| nucleotide-binding universal stress protein, uspa family | SAMN05421512_109215 | Not Available | Negative | 3532944 - 3533774 | 28924.3 |
| uncaracterized surface protein containing fasciclin (fas1) repeats | SAMN05421512_109216 | Not Available | Positive | 3534106 - 3534594 | 16515.6 |
| hypothetical protein | SAMN05421512_109217 | Not Available | Negative | 3534677 - 3535831 | 40915.7 |
| two-component system, ntrc family, c4-dicarboxylate transport sensor histidine kinase dctb | SAMN05421512_109218 | Not Available | Positive | 3535894 - 3537828 | 70410.7 |
| two-component system, ntrc family, c4-dicarboxylate transport response regulator dctd | SAMN05421512_109219 | Not Available | Positive | 3537866 - 3539275 | 51333.9 |
| trap-type c4-dicarboxylate transport system, substrate-binding protein | SAMN05421512_109220 | Not Available | Positive | 3539536 - 3540546 | 37040.2 |
| trap-type mannitol/chloroaromatic compound transport system, small permease component | SAMN05421512_109221 | Not Available | Positive | 3540731 - 3541375 | 23534.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
