Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Stappiaceae
Genus
Stappia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Stappiaceae |
| Genus | Stappia |
| Species | Stappia indica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
825960 bp
Thymine Count
819759 bp
Guanine Count
1662501 bp
Cytosine Count
1703840 bp
Genome Length
5015470 bp
Protein-coding Genes
4471 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| iron(iii) transport system permease protein | SAMN05421512_109202 | Not Available | Negative | 3515048 - 3516760 | 61640.6 |
| iron(iii) transport system substrate-binding protein | SAMN05421512_109203 | Not Available | Negative | 3516923 - 3517975 | 38072.8 |
| threonine dehydratase | SAMN05421512_109204 | Not Available | Negative | 3518196 - 3519158 | 33503.0 |
| pas/pac sensor signal transduction histidine kinase | SAMN05421512_109205 | Not Available | Negative | 3519291 - 3523598 | 151399.0 |
| phasin | SAMN05421512_109206 | Not Available | Positive | 3524032 - 3524418 | 14344.8 |
| phasin | SAMN05421512_109207 | Not Available | Positive | 3524705 - 3525229 | 18959.4 |
| Trna-his | Not Available | Not Available | Positive | 3525411 - 3525487 | Not Available |
| hypothetical protein | SAMN05421512_109209 | Not Available | Positive | 3525674 - 3526081 | 14990.9 |
| hypothetical protein | SAMN05421512_109210 | Not Available | Positive | 3526230 - 3526676 | 17243.0 |
| gcra cell cycle regulator | SAMN05421512_109211 | Not Available | Positive | 3526928 - 3527458 | 19713.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
