Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Stappiaceae
Genus
Stappia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Stappiaceae |
| Genus | Stappia |
| Species | Stappia indica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
825960 bp
Thymine Count
819759 bp
Guanine Count
1662501 bp
Cytosine Count
1703840 bp
Genome Length
5015470 bp
Protein-coding Genes
4471 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterized protein involved in outer membrane biogenesis | SAMN05421512_109192 | Not Available | Positive | 3502354 - 3504126 | 60660.9 |
| putrescine transport system permease protein | SAMN05421512_109193 | Not Available | Negative | 3504149 - 3504970 | 29734.9 |
| putrescine transport system permease protein | SAMN05421512_109194 | Not Available | Negative | 3505023 - 3505949 | 34407.0 |
| putrescine transport system atp-binding protein | SAMN05421512_109195 | Not Available | Negative | 3506000 - 3507148 | 42949.9 |
| putrescine transport system substrate-binding protein | SAMN05421512_109196 | Not Available | Negative | 3507215 - 3508306 | 40635.2 |
| glutamate--putrescine ligase | SAMN05421512_109197 | Not Available | Negative | 3508528 - 3509919 | 51074.7 |
| dna-binding transcriptional regulator, gntr family | SAMN05421512_109198 | Not Available | Positive | 3510028 - 3510744 | 25574.8 |
| l-glutamine synthetase | SAMN05421512_109199 | Not Available | Positive | 3510855 - 3512252 | 52211.7 |
| putrescine aminotransferase | SAMN05421512_109200 | Not Available | Positive | 3512310 - 3513707 | 50692.6 |
| gamma-glutamylputrescine oxidase | SAMN05421512_109201 | Not Available | Positive | 3513742 - 3515034 | 46743.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
