Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Stappiaceae
Genus
Stappia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Stappiaceae |
| Genus | Stappia |
| Species | Stappia indica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
825960 bp
Thymine Count
819759 bp
Guanine Count
1662501 bp
Cytosine Count
1703840 bp
Genome Length
5015470 bp
Protein-coding Genes
4471 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| monoamine oxidase | SAMN05421512_101175 | Not Available | Positive | 185902 - 187152 | 43871.9 |
| protease ftsh subunit hflk | SAMN05421512_101176 | Not Available | Positive | 187377 - 188546 | 41597.9 |
| protease ftsh subunit hflc | SAMN05421512_101177 | Not Available | Positive | 188546 - 189478 | 34759.7 |
| hypothetical protein | SAMN05421512_101178 | Not Available | Positive | 189475 - 189660 | 6465.33 |
| serine protease do | SAMN05421512_101179 | Not Available | Positive | 189777 - 191300 | 53122.5 |
| phosphoserine phosphatase | SAMN05421512_101180 | Not Available | Negative | 191410 - 192306 | 31186.5 |
| trna dimethylallyltransferase | SAMN05421512_101181 | Not Available | Positive | 192339 - 193253 | 33163.8 |
| protein n-acetyltransferase, rimj/riml family | SAMN05421512_101182 | Not Available | Positive | 193509 - 194051 | 19889.4 |
| 2-isopropylmalate synthase | SAMN05421512_101183 | Not Available | Negative | 194163 - 195710 | 55952.3 |
| acetolactate synthase, small subunit | SAMN05421512_101184 | Not Available | Negative | 196167 - 196739 | 21038.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
